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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942126.1_cds_XP_016485695.1_76599
CDS Infomation

[gene=LOC107806097] [db_xref=GeneID:107806097] [protein=putative E3 ubiquitin-protein ligase RING1a] [protein_id=XP_016485695.1] [location=complement(join(26969..27407,27636..27710,27813..27862,27930..28078,28624..28709,28813..28844,28941..29045))] [gbkey=CDS]
Sequence

ATGGTGAATGAAGAGCTGAAGAGAACCCCCAATAACTCAAAAGCCGAAAATGGAGAAAAA
CGTGAGGCGTTGTTCAGCCCAAGATTCAGATCAGTGGCTGCAATGCGTTTCGTGACGCCG
CCTTCTAATTCCAGAAGGAAACGAAGGGCTCAGAAGAAGAGCCCTGCTTCCGTGCGCGTT
ACTGTTCTTGATCTTGATGATGATGATGACACTTCAAAACAAGAAACTGAGAAAAAGAAG
ACAGAACCAAAATCCACAGGAGGAGGAGATAAGAAAGAAGCTGAAGCATCAGCAAAACAG
AATTCTTGTGTATCCTCTTCTGCTTCAGCCAATCTCTGCGTGGATCGACTTCGTGAAGAG
CTTTCTTGTGCCATTTGTTTGGAGATTTGTTTTGAGCCCAGTACCACTCCTTGTGGACAC
AGTTTCTGTAGAAAGTGTTTGCGATCTGCTGCTGATAAATACGGGAAGAAATGCCCTAAG
TGCAGACATCTTATCAGCAATGGGAAATCTTGCACTGTCAATGCAGTCCTTTGGAATACA
ATTCAACTACTATTTCCTAAAGATGTTGAAGCAAGAAAGGCAGCTGGAGCTTCAGATAGT
AGAGAAGCTCAGCATCAAAGTCCAGCAAGAATTGCTAGTCATTCTAATATTTCAAGAAGC
AGAATAGACAGGGTCCTAGCTTTACATAGTCCAGAATCTGGCTCTCGAGATCCACAAAGA
AGGAATTCTCACATTATGAAAATACATAGTGTCAGGCCATCTGGGACATCAAACGGAGGT
GGAGAGACTAGTCTAAGGGCAAGGAGACCACCAAGCCAAGATCAGGATGCTGCATTAGCA
TTGCGATTGCAGTATAGGAATTCTCTTGCTCTGGCCAGATCGAATTTGAGGGCCATGGCA
TCAAGAGCCATTAACAACATTCATATTAGAGACTGA

Peptide Sequence

PEP ID

XP_016485695.1
PEP Infomation

PREDICTED: putative E3 ubiquitin-protein ligase RING1a [Nicotiana tabacum]
Sequence

MVNEELKRTPNNSKAENGEKREALFSPRFRSVAAMRFVTPPSNSRRKRRAQKKSPASVRV
TVLDLDDDDDTSKQETEKKKTEPKSTGGGDKKEAEASAKQNSCVSSSASANLCVDRLREE
LSCAICLEICFEPSTTPCGHSFCRKCLRSAADKYGKKCPKCRHLISNGKSCTVNAVLWNT
IQLLFPKDVEARKAAGASDSREAQHQSPARIASHSNISRSRIDRVLALHSPESGSRDPQR
RNSHIMKIHSVRPSGTSNGGGETSLRARRPPSQDQDAALALRLQYRNSLALARSNLRAMA
SRAINNIHIRD

Transcript Sequence

Gene sequence data has not been registered.